Cluster: Rep_527_CGC57
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_3236 | 3826419 | 3829286 | - | GH2 |
| TC | Rep_527_c_0 | Rep_527_c_0_3237 | 3829383 | 3830840 | - | 2.A.1.14.25 |
| pfam | Rep_527_c_0 | Rep_527_c_0_3238 | 3831061 | 3831981 | - | KduI |
| TC | Rep_527_c_0 | Rep_527_c_0_3239 | 3832006 | 3833397 | - | 4.A.5.1.4 |
Gene ID: Rep_527_c_0_3236
Type: CAZyme
Location: 3826419 - 3829286 (-)
Type: CAZyme
Location: 3826419 - 3829286 (-)
Gene ID: Rep_527_c_0_3237
Type: TC
Location: 3829383 - 3830840 (-)
Type: TC
Location: 3829383 - 3830840 (-)
Gene ID: Rep_527_c_0_3238
Type: pfam
Location: 3831061 - 3831981 (-)
Type: pfam
Location: 3831061 - 3831981 (-)
Gene ID: Rep_527_c_0_3239
Type: TC
Location: 3832006 - 3833397 (-)
Type: TC
Location: 3832006 - 3833397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.