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Cluster: Rep_527_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_527_c_0 Rep_527_c_0_3093 3656886 3658244 + 9.B.145.1.2
pfam Rep_527_c_0 Rep_527_c_0_3094 3658397 3659155 - NigD_N | NigD_C
NULL(UNKNOWN) Rep_527_c_0 Rep_527_c_0_3095 3659244 3659369 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_527_c_0 Rep_527_c_0_3096 3659543 3662170 + 3.A.3.2.42
pfam Rep_527_c_0 Rep_527_c_0_3097 3662167 3662787 + Hydrolase | HAD_2
pfam Rep_527_c_0 Rep_527_c_0_3098 3662792 3663724 + Flavokinase | FAD_syn
TC Rep_527_c_0 Rep_527_c_0_3099 3663784 3665673 + 1.I.1.1.3
CAZyme Rep_527_c_0 Rep_527_c_0_3100 3665719 3666702 - GH43_29
Gene ID: Rep_527_c_0_3093
Type: TC
Location: 3656886 - 3658244 (+)
Gene ID: Rep_527_c_0_3094
Type: pfam
Location: 3658397 - 3659155 (-)
Gene ID: Rep_527_c_0_3095
Type:
Location: 3659244 - 3659369 (+)
Gene ID: Rep_527_c_0_3096
Type: TC
Location: 3659543 - 3662170 (+)
Gene ID: Rep_527_c_0_3097
Type: pfam
Location: 3662167 - 3662787 (+)
Gene ID: Rep_527_c_0_3098
Type: pfam
Location: 3662792 - 3663724 (+)
Gene ID: Rep_527_c_0_3099
Type: TC
Location: 3663784 - 3665673 (+)
Gene ID: Rep_527_c_0_3100
Type: CAZyme
Location: 3665719 - 3666702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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