Cluster: Rep_527_CGC51
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2977 | 3487732 | 3488850 | - | GT1 |
| pfam | Rep_527_c_0 | Rep_527_c_0_2978 | 3488847 | 3489656 | - | Metallophos |
| NULL(UNKNOWN) | Rep_527_c_0 | Rep_527_c_0_2979 | 3489854 | 3490045 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_527_c_0 | Rep_527_c_0_2980 | 3490142 | 3490762 | - | 2.A.124.1.4 |
Gene ID: Rep_527_c_0_2977
Type: CAZyme
Location: 3487732 - 3488850 (-)
Type: CAZyme
Location: 3487732 - 3488850 (-)
Gene ID: Rep_527_c_0_2978
Type: pfam
Location: 3488847 - 3489656 (-)
Type: pfam
Location: 3488847 - 3489656 (-)
Gene ID: Rep_527_c_0_2979
Type:
Location: 3489854 - 3490045 (-)
Type:
Location: 3489854 - 3490045 (-)
Gene ID: Rep_527_c_0_2980
Type: TC
Location: 3490142 - 3490762 (-)
Type: TC
Location: 3490142 - 3490762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.