Cluster: Rep_527_CGC50
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_2907 | 3404919 | 3405686 | + | 3.A.1.15.11 |
| pfam | Rep_527_c_0 | Rep_527_c_0_2908 | 3405798 | 3409130 | + | TMEM260-like |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2909 | 3409266 | 3409877 | + | CE4 |
Gene ID: Rep_527_c_0_2907
Type: TC
Location: 3404919 - 3405686 (+)
Type: TC
Location: 3404919 - 3405686 (+)
Gene ID: Rep_527_c_0_2908
Type: pfam
Location: 3405798 - 3409130 (+)
Type: pfam
Location: 3405798 - 3409130 (+)
Gene ID: Rep_527_c_0_2909
Type: CAZyme
Location: 3409266 - 3409877 (+)
Type: CAZyme
Location: 3409266 - 3409877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.