Cluster: Rep_527_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- CGC Family ID: CGCFAM_10481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_361 | 409916 | 410485 | - | 2.A.51.1.6 |
| TC | Rep_527_c_0 | Rep_527_c_0_362 | 410499 | 411041 | - | 2.A.51.1.6 |
| TF | Rep_527_c_0 | Rep_527_c_0_363 | 411052 | 415137 | - | 0035607 | 0036286 |
| pfam | Rep_527_c_0 | Rep_527_c_0_364 | 415171 | 416427 | - | PGK |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_365 | 416737 | 419139 | - | GT51 |
Gene ID: Rep_527_c_0_361
Type: TC
Location: 409916 - 410485 (-)
Type: TC
Location: 409916 - 410485 (-)
Gene ID: Rep_527_c_0_362
Type: TC
Location: 410499 - 411041 (-)
Type: TC
Location: 410499 - 411041 (-)
Gene ID: Rep_527_c_0_363
Type: TF
Location: 411052 - 415137 (-)
Type: TF
Location: 411052 - 415137 (-)
Gene ID: Rep_527_c_0_364
Type: pfam
Location: 415171 - 416427 (-)
Type: pfam
Location: 415171 - 416427 (-)
Gene ID: Rep_527_c_0_365
Type: CAZyme
Location: 416737 - 419139 (-)
Type: CAZyme
Location: 416737 - 419139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.