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Cluster: Rep_527_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_527_c_0 Rep_527_c_0_2890 3379021 3382542 + 1.B.14.6.1
pfam Rep_527_c_0 Rep_527_c_0_2891 3382556 3384529 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_527_c_0 Rep_527_c_0_2892 3384552 3385904 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_527_c_0 Rep_527_c_0_2893 3385962 3387395 + GH51_3
pfam Rep_527_c_0 Rep_527_c_0_2894 3387532 3388155 + Transposase_mut
pfam Rep_527_c_0 Rep_527_c_0_2895 3388266 3388541 + DUF386
CAZyme Rep_527_c_0 Rep_527_c_0_2896 3388728 3390350 + CBM93 | GH33
TC Rep_527_c_0 Rep_527_c_0_2897 3390610 3393816 + 1.B.14.6.1
Gene ID: Rep_527_c_0_2890
Type: TC
Location: 3379021 - 3382542 (+)
Gene ID: Rep_527_c_0_2891
Type: pfam
Location: 3382556 - 3384529 (+)
Gene ID: Rep_527_c_0_2892
Type:
Location: 3384552 - 3385904 (+)
Gene ID: Rep_527_c_0_2893
Type: CAZyme
Location: 3385962 - 3387395 (+)
Gene ID: Rep_527_c_0_2894
Type: pfam
Location: 3387532 - 3388155 (+)
Gene ID: Rep_527_c_0_2895
Type: pfam
Location: 3388266 - 3388541 (+)
Gene ID: Rep_527_c_0_2896
Type: CAZyme
Location: 3388728 - 3390350 (+)
Gene ID: Rep_527_c_0_2897
Type: TC
Location: 3390610 - 3393816 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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