Cluster: Rep_527_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- CGC Family ID: CGCFAM_00332
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2872 | 3357498 | 3360989 | - | CBM67 | GH78 |
| sulfatase | Rep_527_c_0 | Rep_527_c_0_2873 | 3361222 | 3362778 | - | S1_15 |
| pfam | Rep_527_c_0 | Rep_527_c_0_2874 | 3362799 | 3364439 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_527_c_0 | Rep_527_c_0_2875 | 3364446 | 3367751 | - | 1.B.14.6.1 |
Gene ID: Rep_527_c_0_2872
Type: CAZyme
Location: 3357498 - 3360989 (-)
Type: CAZyme
Location: 3357498 - 3360989 (-)
Gene ID: Rep_527_c_0_2873
Type: sulfatase
Location: 3361222 - 3362778 (-)
Type: sulfatase
Location: 3361222 - 3362778 (-)
Gene ID: Rep_527_c_0_2874
Type: pfam
Location: 3362799 - 3364439 (-)
Type: pfam
Location: 3362799 - 3364439 (-)
Gene ID: Rep_527_c_0_2875
Type: TC
Location: 3364446 - 3367751 (-)
Type: TC
Location: 3364446 - 3367751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.