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Cluster: Rep_527_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_527_c_0 Rep_527_c_0_2771 3211957 3212925 - 2.A.1.7.1
NULL(UNKNOWN) Rep_527_c_0 Rep_527_c_0_2772 3212919 3213212 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_527_c_0 Rep_527_c_0_2773 3213226 3214149 - Amidohydro_2
TC Rep_527_c_0 Rep_527_c_0_2774 3214165 3215097 - 8.A.5.1.6
pfam Rep_527_c_0 Rep_527_c_0_2775 3215110 3215490 - rhaM
CAZyme Rep_527_c_0 Rep_527_c_0_2776 3215505 3217145 - GH29
TF Rep_527_c_0 Rep_527_c_0_2777 3217363 3218217 + HTH_AraC | HTH_AraC
TC Rep_527_c_0 Rep_527_c_0_2778 3218231 3219919 - 8.A.46.1.5
TC Rep_527_c_0 Rep_527_c_0_2779 3219941 3223018 - 1.B.14.6.1
CAZyme Rep_527_c_0 Rep_527_c_0_2780 3223517 3225409 - GH97
Gene ID: Rep_527_c_0_2771
Type: TC
Location: 3211957 - 3212925 (-)
Gene ID: Rep_527_c_0_2772
Type:
Location: 3212919 - 3213212 (-)
Gene ID: Rep_527_c_0_2773
Type: pfam
Location: 3213226 - 3214149 (-)
Gene ID: Rep_527_c_0_2774
Type: TC
Location: 3214165 - 3215097 (-)
Gene ID: Rep_527_c_0_2775
Type: pfam
Location: 3215110 - 3215490 (-)
Gene ID: Rep_527_c_0_2776
Type: CAZyme
Location: 3215505 - 3217145 (-)
Gene ID: Rep_527_c_0_2777
Type: TF
Location: 3217363 - 3218217 (+)
Gene ID: Rep_527_c_0_2778
Type: TC
Location: 3218231 - 3219919 (-)
Gene ID: Rep_527_c_0_2779
Type: TC
Location: 3219941 - 3223018 (-)
Gene ID: Rep_527_c_0_2780
Type: CAZyme
Location: 3223517 - 3225409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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