Cluster: Rep_527_CGC42
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2600 | 3035099 | 3036067 | + | GH23 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2601 | 3036107 | 3039220 | + | GH2 |
| TC | Rep_527_c_0 | Rep_527_c_0_2602 | 3039536 | 3040948 | - | 1.A.23.1.4 |
Gene ID: Rep_527_c_0_2600
Type: CAZyme
Location: 3035099 - 3036067 (+)
Type: CAZyme
Location: 3035099 - 3036067 (+)
Gene ID: Rep_527_c_0_2601
Type: CAZyme
Location: 3036107 - 3039220 (+)
Type: CAZyme
Location: 3036107 - 3039220 (+)
Gene ID: Rep_527_c_0_2602
Type: TC
Location: 3039536 - 3040948 (-)
Type: TC
Location: 3039536 - 3040948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.