dbCAN Logo

Cluster: Rep_527_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_527_c_0 Rep_527_c_0_2376 2743992 2744642 - 3.A.1.125.1
pfam Rep_527_c_0 Rep_527_c_0_2377 2744649 2745374 - ThiF
TC Rep_527_c_0 Rep_527_c_0_2378 2745371 2747515 - 2.A.37.2.5
pfam Rep_527_c_0 Rep_527_c_0_2379 2747705 2748715 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme Rep_527_c_0 Rep_527_c_0_2380 2749161 2751149 - GH154
TC Rep_527_c_0 Rep_527_c_0_2381 2751428 2753155 - 8.A.46.1.6
TC Rep_527_c_0 Rep_527_c_0_2382 2753167 2756244 - 1.B.14.6.1
Gene ID: Rep_527_c_0_2376
Type: TC
Location: 2743992 - 2744642 (-)
Gene ID: Rep_527_c_0_2377
Type: pfam
Location: 2744649 - 2745374 (-)
Gene ID: Rep_527_c_0_2378
Type: TC
Location: 2745371 - 2747515 (-)
Gene ID: Rep_527_c_0_2379
Type: pfam
Location: 2747705 - 2748715 (+)
Gene ID: Rep_527_c_0_2380
Type: CAZyme
Location: 2749161 - 2751149 (-)
Gene ID: Rep_527_c_0_2381
Type: TC
Location: 2751428 - 2753155 (-)
Gene ID: Rep_527_c_0_2382
Type: TC
Location: 2753167 - 2756244 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_527_c_0_2381 vegetarian > vegan 2.79194 0.04565

🧭 Explore Read Mapping of CGC

← Back to Cluster List