Cluster: Rep_527_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_2365 | 2730154 | 2731359 | + | 1.A.23.4.5 |
| pfam | Rep_527_c_0 | Rep_527_c_0_2366 | 2731366 | 2731734 | + | 4HBT | FlK |
| TC | Rep_527_c_0 | Rep_527_c_0_2367 | 2732060 | 2733658 | - | 2.A.81.1.2 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2368 | 2733749 | 2736106 | - | GH146 |
Gene ID: Rep_527_c_0_2365
Type: TC
Location: 2730154 - 2731359 (+)
Type: TC
Location: 2730154 - 2731359 (+)
Gene ID: Rep_527_c_0_2366
Type: pfam
Location: 2731366 - 2731734 (+)
Type: pfam
Location: 2731366 - 2731734 (+)
Gene ID: Rep_527_c_0_2367
Type: TC
Location: 2732060 - 2733658 (-)
Type: TC
Location: 2732060 - 2733658 (-)
Gene ID: Rep_527_c_0_2368
Type: CAZyme
Location: 2733749 - 2736106 (-)
Type: CAZyme
Location: 2733749 - 2736106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.