Cluster: Rep_527_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_2329 | 2679834 | 2680994 | - | 2.A.1.7.17 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2330 | 2681035 | 2683227 | - | GH36 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2331 | 2683249 | 2685120 | - | GH32 |
Gene ID: Rep_527_c_0_2329
Type: TC
Location: 2679834 - 2680994 (-)
Type: TC
Location: 2679834 - 2680994 (-)
Gene ID: Rep_527_c_0_2330
Type: CAZyme
Location: 2681035 - 2683227 (-)
Type: CAZyme
Location: 2681035 - 2683227 (-)
Gene ID: Rep_527_c_0_2331
Type: CAZyme
Location: 2683249 - 2685120 (-)
Type: CAZyme
Location: 2683249 - 2685120 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.