dbCAN HGM

Cluster: Rep_527_CGC32

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_527_c_0	Rep_527_c_0_2282	2626181	2628211	+	3.A.16.1.1
pfam	Rep_527_c_0	Rep_527_c_0_2283	2628232	2629089	+	CTP_transf_1
CAZyme	Rep_527_c_0	Rep_527_c_0_2284	2629124	2630275	-	GT19
pfam	Rep_527_c_0	Rep_527_c_0_2285	2630272	2631042	-	SurE
TC	Rep_527_c_0	Rep_527_c_0_2286	2631260	2632027	+	8.A.3.2.3
pfam	Rep_527_c_0	Rep_527_c_0_2287	2632032	2632928	+	ParBc \| HTH_ParB \| ParB_dimer
pfam	Rep_527_c_0	Rep_527_c_0_2288	2632940	2633722	+	DUF5683
CAZyme	Rep_527_c_0	Rep_527_c_0_2289	2633726	2634991	+	GH23

Gene ID: Rep_527_c_0_2282
Type: TC
Location: 2626181 - 2628211 (+)

Gene ID: Rep_527_c_0_2283
Type: pfam
Location: 2628232 - 2629089 (+)

Gene ID: Rep_527_c_0_2284
Type: CAZyme
Location: 2629124 - 2630275 (-)

Gene ID: Rep_527_c_0_2285
Type: pfam
Location: 2630272 - 2631042 (-)

Gene ID: Rep_527_c_0_2286
Type: TC
Location: 2631260 - 2632027 (+)

Gene ID: Rep_527_c_0_2287
Type: pfam
Location: 2632032 - 2632928 (+)

Gene ID: Rep_527_c_0_2288
Type: pfam
Location: 2632940 - 2633722 (+)

Gene ID: Rep_527_c_0_2289
Type: CAZyme
Location: 2633726 - 2634991 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.