Cluster: Rep_527_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_2070 | 2335101 | 2337842 | - | 1.B.42.1.8 |
| STP | Rep_527_c_0 | Rep_527_c_0_2071 | 2337932 | 2338468 | - | HD |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_2072 | 2338520 | 2339707 | + | GH171 |
| TC | Rep_527_c_0 | Rep_527_c_0_2073 | 2339780 | 2341105 | - | 3.A.5.1.1 |
| TC | Rep_527_c_0 | Rep_527_c_0_2074 | 2341172 | 2342494 | - | 2.A.66.1.28 |
Gene ID: Rep_527_c_0_2070
Type: TC
Location: 2335101 - 2337842 (-)
Type: TC
Location: 2335101 - 2337842 (-)
Gene ID: Rep_527_c_0_2071
Type: STP
Location: 2337932 - 2338468 (-)
Type: STP
Location: 2337932 - 2338468 (-)
Gene ID: Rep_527_c_0_2072
Type: CAZyme
Location: 2338520 - 2339707 (+)
Type: CAZyme
Location: 2338520 - 2339707 (+)
Gene ID: Rep_527_c_0_2073
Type: TC
Location: 2339780 - 2341105 (-)
Type: TC
Location: 2339780 - 2341105 (-)
Gene ID: Rep_527_c_0_2074
Type: TC
Location: 2341172 - 2342494 (-)
Type: TC
Location: 2341172 - 2342494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.