Cluster: Rep_527_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_167 | 207327 | 210296 | + | GH3 |
| STP | Rep_527_c_0 | Rep_527_c_0_168 | 210418 | 210585 | + | Fer4 | Fer4 |
| STP | Rep_527_c_0 | Rep_527_c_0_169 | 210862 | 212055 | - | Aminotran_1_2 |
| TC | Rep_527_c_0 | Rep_527_c_0_170 | 212140 | 212841 | - | 1.A.14.2.2 |
Gene ID: Rep_527_c_0_167
Type: CAZyme
Location: 207327 - 210296 (+)
Type: CAZyme
Location: 207327 - 210296 (+)
Gene ID: Rep_527_c_0_168
Type: STP
Location: 210418 - 210585 (+)
Type: STP
Location: 210418 - 210585 (+)
Gene ID: Rep_527_c_0_169
Type: STP
Location: 210862 - 212055 (-)
Type: STP
Location: 210862 - 212055 (-)
Gene ID: Rep_527_c_0_170
Type: TC
Location: 212140 - 212841 (-)
Type: TC
Location: 212140 - 212841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.