Cluster: Rep_527_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- CGC Family ID: CGCFAM_04271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_1431 | 1632051 | 1633247 | + | 2.A.1.7.2 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_1432 | 1633312 | 1634067 | + | GT2 |
| TC | Rep_527_c_0 | Rep_527_c_0_1433 | 1634238 | 1635647 | + | 9.B.18.1.1 |
| pfam | Rep_527_c_0 | Rep_527_c_0_1434 | 1635682 | 1636224 | + | DUF3575 |
| TC | Rep_527_c_0 | Rep_527_c_0_1435 | 1636238 | 1638499 | + | 1.B.14.6.8 |
Gene ID: Rep_527_c_0_1431
Type: TC
Location: 1632051 - 1633247 (+)
Type: TC
Location: 1632051 - 1633247 (+)
Gene ID: Rep_527_c_0_1432
Type: CAZyme
Location: 1633312 - 1634067 (+)
Type: CAZyme
Location: 1633312 - 1634067 (+)
Gene ID: Rep_527_c_0_1433
Type: TC
Location: 1634238 - 1635647 (+)
Type: TC
Location: 1634238 - 1635647 (+)
Gene ID: Rep_527_c_0_1434
Type: pfam
Location: 1635682 - 1636224 (+)
Type: pfam
Location: 1635682 - 1636224 (+)
Gene ID: Rep_527_c_0_1435
Type: TC
Location: 1636238 - 1638499 (+)
Type: TC
Location: 1636238 - 1638499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.