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Cluster: Rep_527_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_527_c_0 Rep_527_c_0_908 1051637 1054423 + GH2
TC Rep_527_c_0 Rep_527_c_0_909 1054451 1055836 + 2.A.1.1.55
pfam Rep_527_c_0 Rep_527_c_0_910 1055945 1059310 + TPR_6 | TPR_8 | TPR_8 | DUF5107
CAZyme Rep_527_c_0 Rep_527_c_0_911 1059511 1061484 + GH35
TC Rep_527_c_0 Rep_527_c_0_912 1061546 1064611 + 1.B.14.6.1
pfam Rep_527_c_0 Rep_527_c_0_913 1064612 1066216 + SusD_RagB | SusD-like_3
TF Rep_527_c_0 Rep_527_c_0_914 1066269 1067150 - HTH_AraC | HTH_AraC
CAZyme Rep_527_c_0 Rep_527_c_0_915 1067353 1070148 + GH2
CAZyme Rep_527_c_0 Rep_527_c_0_916 1070234 1071640 + CE20
CAZyme Rep_527_c_0 Rep_527_c_0_917 1071637 1073853 + CBM67 | GH78
TC Rep_527_c_0 Rep_527_c_0_918 1074032 1076509 - 9.A.8.1.6
Gene ID: Rep_527_c_0_908
Type: CAZyme
Location: 1051637 - 1054423 (+)
Gene ID: Rep_527_c_0_909
Type: TC
Location: 1054451 - 1055836 (+)
Gene ID: Rep_527_c_0_910
Type: pfam
Location: 1055945 - 1059310 (+)
Gene ID: Rep_527_c_0_911
Type: CAZyme
Location: 1059511 - 1061484 (+)
Gene ID: Rep_527_c_0_912
Type: TC
Location: 1061546 - 1064611 (+)
Gene ID: Rep_527_c_0_913
Type: pfam
Location: 1064612 - 1066216 (+)
Gene ID: Rep_527_c_0_914
Type: TF
Location: 1066269 - 1067150 (-)
Gene ID: Rep_527_c_0_915
Type: CAZyme
Location: 1067353 - 1070148 (+)
Gene ID: Rep_527_c_0_916
Type: CAZyme
Location: 1070234 - 1071640 (+)
Gene ID: Rep_527_c_0_917
Type: CAZyme
Location: 1071637 - 1073853 (+)
Gene ID: Rep_527_c_0_918
Type: TC
Location: 1074032 - 1076509 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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