Cluster: Rep_527_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_527_c_0 | Rep_527_c_0_810 | 918642 | 919490 | + | 2.A.7.3.2 |
| NULL(UNKNOWN) | Rep_527_c_0 | Rep_527_c_0_811 | 919620 | 920861 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_527_c_0 | Rep_527_c_0_812 | 920897 | 922522 | + | 1.B.9.4.2 |
| pfam | Rep_527_c_0 | Rep_527_c_0_813 | 922587 | 923687 | - | DUF4421 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_814 | 923768 | 924757 | - | GH179 |
| STP | Rep_527_c_0 | Rep_527_c_0_815 | 924770 | 925588 | - | SBP_bac_3 |
| TC | Rep_527_c_0 | Rep_527_c_0_816 | 925599 | 927686 | - | 1.B.14.15.2 |
Gene ID: Rep_527_c_0_810
Type: TC
Location: 918642 - 919490 (+)
Type: TC
Location: 918642 - 919490 (+)
Gene ID: Rep_527_c_0_811
Type:
Location: 919620 - 920861 (+)
Type:
Location: 919620 - 920861 (+)
Gene ID: Rep_527_c_0_812
Type: TC
Location: 920897 - 922522 (+)
Type: TC
Location: 920897 - 922522 (+)
Gene ID: Rep_527_c_0_813
Type: pfam
Location: 922587 - 923687 (-)
Type: pfam
Location: 922587 - 923687 (-)
Gene ID: Rep_527_c_0_814
Type: CAZyme
Location: 923768 - 924757 (-)
Type: CAZyme
Location: 923768 - 924757 (-)
Gene ID: Rep_527_c_0_815
Type: STP
Location: 924770 - 925588 (-)
Type: STP
Location: 924770 - 925588 (-)
Gene ID: Rep_527_c_0_816
Type: TC
Location: 925599 - 927686 (-)
Type: TC
Location: 925599 - 927686 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.