dbCAN Logo

Cluster: Rep_527_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_527_c_0 Rep_527_c_0_771 881335 881940 - 3.A.8.1.1
NULL(UNKNOWN) Rep_527_c_0 Rep_527_c_0_772 881944 882060 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_527_c_0 Rep_527_c_0_773 882218 886552 + 2.A.6.1.2
pfam Rep_527_c_0 Rep_527_c_0_774 886573 887487 + HlyD_3 | HlyD_D23
TC Rep_527_c_0 Rep_527_c_0_775 887501 888544 + 9.B.33.1.1
TF Rep_527_c_0 Rep_527_c_0_776 888541 889299 + LytTR
TC Rep_527_c_0 Rep_527_c_0_777 889418 891037 + 3.A.1.121.4
TC Rep_527_c_0 Rep_527_c_0_778 891246 892403 + 9.B.97.1.2
pfam Rep_527_c_0 Rep_527_c_0_779 892410 892889 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme Rep_527_c_0 Rep_527_c_0_780 893031 893921 + GH73
Gene ID: Rep_527_c_0_771
Type: TC
Location: 881335 - 881940 (-)
Gene ID: Rep_527_c_0_772
Type:
Location: 881944 - 882060 (-)
Gene ID: Rep_527_c_0_773
Type: TC
Location: 882218 - 886552 (+)
Gene ID: Rep_527_c_0_774
Type: pfam
Location: 886573 - 887487 (+)
Gene ID: Rep_527_c_0_775
Type: TC
Location: 887501 - 888544 (+)
Gene ID: Rep_527_c_0_776
Type: TF
Location: 888541 - 889299 (+)
Gene ID: Rep_527_c_0_777
Type: TC
Location: 889418 - 891037 (+)
Gene ID: Rep_527_c_0_778
Type: TC
Location: 891246 - 892403 (+)
Gene ID: Rep_527_c_0_779
Type: pfam
Location: 892410 - 892889 (-)
Gene ID: Rep_527_c_0_780
Type: CAZyme
Location: 893031 - 893921 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List