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Cluster: Rep_523_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_523_c_167 Rep_523_c_167_1 238 954 + 9.B.186.1.3
CAZyme Rep_523_c_167 Rep_523_c_167_2 1033 1749 + GT51
pfam Rep_523_c_167 Rep_523_c_167_3 1733 2569 - AmiA-like
TC Rep_523_c_167 Rep_523_c_167_4 2559 3200 - 1.A.62.2.1
TC Rep_523_c_167 Rep_523_c_167_5 3231 4664 - 9.B.168.1.2
peptidase Rep_523_c_167 Rep_523_c_167_6 4860 6458 + C26.964
TC Rep_523_c_167 Rep_523_c_167_7 6489 8342 + 2.A.9.3.1
CAZyme Rep_523_c_167 Rep_523_c_167_8 8562 10529 + GH20
peptidase Rep_523_c_167 Rep_523_c_167_9 10747 12864 + S09.075
pfam Rep_523_c_167 Rep_523_c_167_10 12957 13610 - CBM9_2
CAZyme Rep_523_c_167 Rep_523_c_167_11 13771 15777 + GH97
TC Rep_523_c_167 Rep_523_c_167_12 15881 18529 - 3.A.3.4.1
Gene ID: Rep_523_c_167_1
Type: TC
Location: 238 - 954 (+)
Gene ID: Rep_523_c_167_2
Type: CAZyme
Location: 1033 - 1749 (+)
Gene ID: Rep_523_c_167_3
Type: pfam
Location: 1733 - 2569 (-)
Gene ID: Rep_523_c_167_4
Type: TC
Location: 2559 - 3200 (-)
Gene ID: Rep_523_c_167_5
Type: TC
Location: 3231 - 4664 (-)
Gene ID: Rep_523_c_167_6
Type: peptidase
Location: 4860 - 6458 (+)
Gene ID: Rep_523_c_167_7
Type: TC
Location: 6489 - 8342 (+)
Gene ID: Rep_523_c_167_8
Type: CAZyme
Location: 8562 - 10529 (+)
Gene ID: Rep_523_c_167_9
Type: peptidase
Location: 10747 - 12864 (+)
Gene ID: Rep_523_c_167_10
Type: pfam
Location: 12957 - 13610 (-)
Gene ID: Rep_523_c_167_11
Type: CAZyme
Location: 13771 - 15777 (+)
Gene ID: Rep_523_c_167_12
Type: TC
Location: 15881 - 18529 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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