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Cluster: Rep_523_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_523_c_147 Rep_523_c_147_14 18832 19578 - 9.B.158.1.1
CAZyme Rep_523_c_147 Rep_523_c_147_15 19745 21979 - GH92
CAZyme Rep_523_c_147 Rep_523_c_147_16 22084 24120 - GH20
CAZyme Rep_523_c_147 Rep_523_c_147_17 24155 26479 - GH20
CAZyme Rep_523_c_147 Rep_523_c_147_18 26508 29072 - GH2
TC Rep_523_c_147 Rep_523_c_147_19 29682 31544 + 3.A.16.1.2
pfam Rep_523_c_147 Rep_523_c_147_20 32102 32386 + Lys_export
TC Rep_523_c_147 Rep_523_c_147_21 32391 32996 + 2.A.124.1.4
Gene ID: Rep_523_c_147_14
Type: TC
Location: 18832 - 19578 (-)
Gene ID: Rep_523_c_147_15
Type: CAZyme
Location: 19745 - 21979 (-)
Gene ID: Rep_523_c_147_16
Type: CAZyme
Location: 22084 - 24120 (-)
Gene ID: Rep_523_c_147_17
Type: CAZyme
Location: 24155 - 26479 (-)
Gene ID: Rep_523_c_147_18
Type: CAZyme
Location: 26508 - 29072 (-)
Gene ID: Rep_523_c_147_19
Type: TC
Location: 29682 - 31544 (+)
Gene ID: Rep_523_c_147_20
Type: pfam
Location: 32102 - 32386 (+)
Gene ID: Rep_523_c_147_21
Type: TC
Location: 32391 - 32996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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