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Cluster: Rep_523_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_523_c_135 Rep_523_c_135_19 28273 29169 + GT2
TC Rep_523_c_135 Rep_523_c_135_20 29253 31094 - 3.A.1.106.1
pfam Rep_523_c_135 Rep_523_c_135_21 31235 32149 + Lip_A_acyltrans
CAZyme Rep_523_c_135 Rep_523_c_135_22 32183 33133 + GT2
pfam Rep_523_c_135 Rep_523_c_135_23 33145 33945 - DUF5672
CAZyme Rep_523_c_135 Rep_523_c_135_24 33961 34884 - GT8
CAZyme Rep_523_c_135 Rep_523_c_135_25 34954 36006 + GT90
CAZyme Rep_523_c_135 Rep_523_c_135_26 36019 37737 + GT83
pfam Rep_523_c_135 Rep_523_c_135_27 37727 38125 + GtrA_DPMS_TM
CAZyme Rep_523_c_135 Rep_523_c_135_28 38122 39072 + GT2
Gene ID: Rep_523_c_135_19
Type: CAZyme
Location: 28273 - 29169 (+)
Gene ID: Rep_523_c_135_20
Type: TC
Location: 29253 - 31094 (-)
Gene ID: Rep_523_c_135_21
Type: pfam
Location: 31235 - 32149 (+)
Gene ID: Rep_523_c_135_22
Type: CAZyme
Location: 32183 - 33133 (+)
Gene ID: Rep_523_c_135_23
Type: pfam
Location: 33145 - 33945 (-)
Gene ID: Rep_523_c_135_24
Type: CAZyme
Location: 33961 - 34884 (-)
Gene ID: Rep_523_c_135_25
Type: CAZyme
Location: 34954 - 36006 (+)
Gene ID: Rep_523_c_135_26
Type: CAZyme
Location: 36019 - 37737 (+)
Gene ID: Rep_523_c_135_27
Type: pfam
Location: 37727 - 38125 (+)
Gene ID: Rep_523_c_135_28
Type: CAZyme
Location: 38122 - 39072 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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