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Cluster: Rep_523_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_523_c_128 Rep_523_c_128_3 2764 5442 + GH77
TC Rep_523_c_128 Rep_523_c_128_4 5650 7017 - 2.A.2.6.2
pfam Rep_523_c_128 Rep_523_c_128_5 7054 8649 - DUF6377
CAZyme Rep_523_c_128 Rep_523_c_128_6 8878 10731 + GH13_46
CAZyme Rep_523_c_128 Rep_523_c_128_7 10910 13090 + GH97
TC Rep_523_c_128 Rep_523_c_128_8 13202 16282 + 1.B.14.6.1
TC Rep_523_c_128 Rep_523_c_128_9 16298 17926 + 8.A.46.1.1
pfam Rep_523_c_128 Rep_523_c_128_10 17953 19065 + SusE
CAZyme Rep_523_c_128 Rep_523_c_128_11 19142 21391 + GH13_10
Gene ID: Rep_523_c_128_3
Type: CAZyme
Location: 2764 - 5442 (+)
Gene ID: Rep_523_c_128_4
Type: TC
Location: 5650 - 7017 (-)
Gene ID: Rep_523_c_128_5
Type: pfam
Location: 7054 - 8649 (-)
Gene ID: Rep_523_c_128_6
Type: CAZyme
Location: 8878 - 10731 (+)
Gene ID: Rep_523_c_128_7
Type: CAZyme
Location: 10910 - 13090 (+)
Gene ID: Rep_523_c_128_8
Type: TC
Location: 13202 - 16282 (+)
Gene ID: Rep_523_c_128_9
Type: TC
Location: 16298 - 17926 (+)
Gene ID: Rep_523_c_128_10
Type: pfam
Location: 17953 - 19065 (+)
Gene ID: Rep_523_c_128_11
Type: CAZyme
Location: 19142 - 21391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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