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Cluster: Rep_523_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_523_c_115 Rep_523_c_115_29 35244 35594 + 3.D.1.8.1
TC Rep_523_c_115 Rep_523_c_115_30 35618 36184 + 3.D.1.3.1
TC Rep_523_c_115 Rep_523_c_115_31 36187 37809 + 3.D.1.5.1
TC Rep_523_c_115 Rep_523_c_115_32 37911 38999 + 3.D.1.5.1
STP Rep_523_c_115 Rep_523_c_115_33 39014 39481 + Fer4 | Fer4
TC Rep_523_c_115 Rep_523_c_115_34 39491 40006 + 3.D.9.1.1
TC Rep_523_c_115 Rep_523_c_115_35 40022 40339 + 3.D.1.2.1
TC Rep_523_c_115 Rep_523_c_115_36 40366 42255 + 3.D.9.1.1
TC Rep_523_c_115 Rep_523_c_115_37 42283 43764 + 3.D.1.2.1
TC Rep_523_c_115 Rep_523_c_115_38 43772 45181 + 3.D.9.1.1
pfam Rep_523_c_115 Rep_523_c_115_39 45532 46500 + Cupin_3 | PMI_typeI_cat | MPI_cupin_dom
CAZyme Rep_523_c_115 Rep_523_c_115_40 46603 48813 + GH92
Gene ID: Rep_523_c_115_29
Type: TC
Location: 35244 - 35594 (+)
Gene ID: Rep_523_c_115_30
Type: TC
Location: 35618 - 36184 (+)
Gene ID: Rep_523_c_115_31
Type: TC
Location: 36187 - 37809 (+)
Gene ID: Rep_523_c_115_32
Type: TC
Location: 37911 - 38999 (+)
Gene ID: Rep_523_c_115_33
Type: STP
Location: 39014 - 39481 (+)
Gene ID: Rep_523_c_115_34
Type: TC
Location: 39491 - 40006 (+)
Gene ID: Rep_523_c_115_35
Type: TC
Location: 40022 - 40339 (+)
Gene ID: Rep_523_c_115_36
Type: TC
Location: 40366 - 42255 (+)
Gene ID: Rep_523_c_115_37
Type: TC
Location: 42283 - 43764 (+)
Gene ID: Rep_523_c_115_38
Type: TC
Location: 43772 - 45181 (+)
Gene ID: Rep_523_c_115_39
Type: pfam
Location: 45532 - 46500 (+)
Gene ID: Rep_523_c_115_40
Type: CAZyme
Location: 46603 - 48813 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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