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Cluster: Rep_512_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_512_c_125 Rep_512_c_125_21 26542 28107 - GH109
pfam Rep_512_c_125 Rep_512_c_125_22 28409 28636 + DUF2582
pfam Rep_512_c_125 Rep_512_c_125_23 28638 28859 + DUF2582
CAZyme Rep_512_c_125 Rep_512_c_125_24 28953 31292 - GH35
CAZyme Rep_512_c_125 Rep_512_c_125_25 31472 32467 - GH43_19
CAZyme Rep_512_c_125 Rep_512_c_125_26 32513 34072 - GH30_4
CAZyme Rep_512_c_125 Rep_512_c_125_27 34144 35745 - GH30_4
TC Rep_512_c_125 Rep_512_c_125_28 35771 37354 - 8.A.46.1.6
TC Rep_512_c_125 Rep_512_c_125_29 37371 40397 - 1.B.14.6.1
Gene ID: Rep_512_c_125_21
Type: CAZyme
Location: 26542 - 28107 (-)
Gene ID: Rep_512_c_125_22
Type: pfam
Location: 28409 - 28636 (+)
Gene ID: Rep_512_c_125_23
Type: pfam
Location: 28638 - 28859 (+)
Gene ID: Rep_512_c_125_24
Type: CAZyme
Location: 28953 - 31292 (-)
Gene ID: Rep_512_c_125_25
Type: CAZyme
Location: 31472 - 32467 (-)
Gene ID: Rep_512_c_125_26
Type: CAZyme
Location: 32513 - 34072 (-)
Gene ID: Rep_512_c_125_27
Type: CAZyme
Location: 34144 - 35745 (-)
Gene ID: Rep_512_c_125_28
Type: TC
Location: 35771 - 37354 (-)
Gene ID: Rep_512_c_125_29
Type: TC
Location: 37371 - 40397 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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