dbCAN Logo

Cluster: Rep_512_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_512_c_61 Rep_512_c_61_1 416 3028 + PL21_1
pfam Rep_512_c_61 Rep_512_c_61_2 3150 4106 - 2-Hacid_dh | 2-Hacid_dh_C | F420_oxidored
pfam Rep_512_c_61 Rep_512_c_61_3 4188 4940 - adh_short | KR | adh_short_C2 | SDR
CAZyme Rep_512_c_61 Rep_512_c_61_4 4982 6493 - CE20
TC Rep_512_c_61 Rep_512_c_61_5 6514 7977 - 2.A.1.14.25
pfam Rep_512_c_61 Rep_512_c_61_6 7985 8329 - Cupin_2
CAZyme Rep_512_c_61 Rep_512_c_61_7 8347 10518 - PL17 | PL17_2
TC Rep_512_c_61 Rep_512_c_61_8 10798 13908 + 1.B.14.6.1
TC Rep_512_c_61 Rep_512_c_61_9 13921 15405 + 8.A.46.1.3
CAZyme Rep_512_c_61 Rep_512_c_61_10 15420 17777 + PL6 | PL6_1
Gene ID: Rep_512_c_61_1
Type: CAZyme
Location: 416 - 3028 (+)
Gene ID: Rep_512_c_61_2
Type: pfam
Location: 3150 - 4106 (-)
Gene ID: Rep_512_c_61_3
Type: pfam
Location: 4188 - 4940 (-)
Gene ID: Rep_512_c_61_4
Type: CAZyme
Location: 4982 - 6493 (-)
Gene ID: Rep_512_c_61_5
Type: TC
Location: 6514 - 7977 (-)
Gene ID: Rep_512_c_61_6
Type: pfam
Location: 7985 - 8329 (-)
Gene ID: Rep_512_c_61_7
Type: CAZyme
Location: 8347 - 10518 (-)
Gene ID: Rep_512_c_61_8
Type: TC
Location: 10798 - 13908 (+)
Gene ID: Rep_512_c_61_9
Type: TC
Location: 13921 - 15405 (+)
Gene ID: Rep_512_c_61_10
Type: CAZyme
Location: 15420 - 17777 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List