dbCAN Logo

Cluster: Rep_512_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_512_c_54 Rep_512_c_54_51 69673 70566 + GT2
NULL(UNKNOWN) Rep_512_c_54 Rep_512_c_54_52 70573 71418 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_512_c_54 Rep_512_c_54_53 71444 72499 - GT4
NULL(UNKNOWN) Rep_512_c_54 Rep_512_c_54_54 72590 73501 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_512_c_54 Rep_512_c_54_55 73606 74868 + GT4
CAZyme Rep_512_c_54 Rep_512_c_54_56 74861 75637 + GT2
TC Rep_512_c_54 Rep_512_c_54_57 75788 76204 + 9.B.35.1.2
TC Rep_512_c_54 Rep_512_c_54_58 76323 78812 - 9.B.144.1.4
Gene ID: Rep_512_c_54_51
Type: CAZyme
Location: 69673 - 70566 (+)
Gene ID: Rep_512_c_54_52
Type:
Location: 70573 - 71418 (-)
Gene ID: Rep_512_c_54_53
Type: CAZyme
Location: 71444 - 72499 (-)
Gene ID: Rep_512_c_54_54
Type:
Location: 72590 - 73501 (+)
Gene ID: Rep_512_c_54_55
Type: CAZyme
Location: 73606 - 74868 (+)
Gene ID: Rep_512_c_54_56
Type: CAZyme
Location: 74861 - 75637 (+)
Gene ID: Rep_512_c_54_57
Type: TC
Location: 75788 - 76204 (+)
Gene ID: Rep_512_c_54_58
Type: TC
Location: 76323 - 78812 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List