Cluster: Rep_512_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_512
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_512_c_31 | Rep_512_c_31_1 | 999 | 2384 | - | GH27 |
| sulfatase | Rep_512_c_31 | Rep_512_c_31_2 | 2516 | 3997 | + | S1_20 |
| NULL(UNKNOWN) | Rep_512_c_31 | Rep_512_c_31_3 | 4015 | 5253 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_512_c_31 | Rep_512_c_31_4 | 5261 | 7057 | + | 2.A.21.3.2 |
| CAZyme | Rep_512_c_31 | Rep_512_c_31_5 | 7080 | 10004 | + | GH2 |
| CAZyme | Rep_512_c_31 | Rep_512_c_31_6 | 10031 | 12604 | + | CBM91 | GH43_12 | GH43_17 |
Gene ID: Rep_512_c_31_1
Type: CAZyme
Location: 999 - 2384 (-)
Type: CAZyme
Location: 999 - 2384 (-)
Gene ID: Rep_512_c_31_2
Type: sulfatase
Location: 2516 - 3997 (+)
Type: sulfatase
Location: 2516 - 3997 (+)
Gene ID: Rep_512_c_31_3
Type:
Location: 4015 - 5253 (+)
Type:
Location: 4015 - 5253 (+)
Gene ID: Rep_512_c_31_4
Type: TC
Location: 5261 - 7057 (+)
Type: TC
Location: 5261 - 7057 (+)
Gene ID: Rep_512_c_31_5
Type: CAZyme
Location: 7080 - 10004 (+)
Type: CAZyme
Location: 7080 - 10004 (+)
Gene ID: Rep_512_c_31_6
Type: CAZyme
Location: 10031 - 12604 (+)
Type: CAZyme
Location: 10031 - 12604 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.