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Cluster: Rep_509_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_509_c_42 Rep_509_c_42_1 119 1270 - GT19
pfam Rep_509_c_42 Rep_509_c_42_2 1267 2040 - SurE
TC Rep_509_c_42 Rep_509_c_42_3 2358 3128 + 8.A.3.2.3
pfam Rep_509_c_42 Rep_509_c_42_4 3153 4052 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_509_c_42 Rep_509_c_42_5 4065 4859 + DUF5683
CAZyme Rep_509_c_42 Rep_509_c_42_6 4864 6102 + GH23
STP Rep_509_c_42 Rep_509_c_42_7 6183 8459 + HD
TF Rep_509_c_42 Rep_509_c_42_8 8531 8878 - MerR
TC Rep_509_c_42 Rep_509_c_42_9 8901 9869 - 1.A.34.1.3
Gene ID: Rep_509_c_42_1
Type: CAZyme
Location: 119 - 1270 (-)
Gene ID: Rep_509_c_42_2
Type: pfam
Location: 1267 - 2040 (-)
Gene ID: Rep_509_c_42_3
Type: TC
Location: 2358 - 3128 (+)
Gene ID: Rep_509_c_42_4
Type: pfam
Location: 3153 - 4052 (+)
Gene ID: Rep_509_c_42_5
Type: pfam
Location: 4065 - 4859 (+)
Gene ID: Rep_509_c_42_6
Type: CAZyme
Location: 4864 - 6102 (+)
Gene ID: Rep_509_c_42_7
Type: STP
Location: 6183 - 8459 (+)
Gene ID: Rep_509_c_42_8
Type: TF
Location: 8531 - 8878 (-)
Gene ID: Rep_509_c_42_9
Type: TC
Location: 8901 - 9869 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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