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Cluster: Rep_509_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_509_c_13 Rep_509_c_13_9 7006 9195 + 3.A.1.112.9
pfam Rep_509_c_13 Rep_509_c_13_10 9202 10605 + HlyD_3
TC Rep_509_c_13 Rep_509_c_13_11 10616 13228 + 1.C.105.2.12
CAZyme Rep_509_c_13 Rep_509_c_13_12 13249 15411 - GH65
TC Rep_509_c_13 Rep_509_c_13_13 15568 18669 + 1.B.14.6.1
pfam Rep_509_c_13 Rep_509_c_13_14 18691 20178 + SusD_RagB | SusD-like_3
pfam Rep_509_c_13 Rep_509_c_13_15 20279 21454 + Thioredoxin | Thioredox_DsbH | Thioredoxin_2 | Thioredoxin_7
TC Rep_509_c_13 Rep_509_c_13_16 21715 23046 - 2.A.33.1.1
Gene ID: Rep_509_c_13_9
Type: TC
Location: 7006 - 9195 (+)
Gene ID: Rep_509_c_13_10
Type: pfam
Location: 9202 - 10605 (+)
Gene ID: Rep_509_c_13_11
Type: TC
Location: 10616 - 13228 (+)
Gene ID: Rep_509_c_13_12
Type: CAZyme
Location: 13249 - 15411 (-)
Gene ID: Rep_509_c_13_13
Type: TC
Location: 15568 - 18669 (+)
Gene ID: Rep_509_c_13_14
Type: pfam
Location: 18691 - 20178 (+)
Gene ID: Rep_509_c_13_15
Type: pfam
Location: 20279 - 21454 (+)
Gene ID: Rep_509_c_13_16
Type: TC
Location: 21715 - 23046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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