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Cluster: Rep_506_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_506_c_3 Rep_506_c_3_29 36464 39184 + GH97
CAZyme Rep_506_c_3 Rep_506_c_3_30 39191 41593 + CBM32 | GH43_34
CAZyme Rep_506_c_3 Rep_506_c_3_31 41619 44027 + GH127
CAZyme Rep_506_c_3 Rep_506_c_3_32 44142 46379 + CE1
NULL(UNKNOWN) Rep_506_c_3 Rep_506_c_3_33 46386 46526 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_506_c_3 Rep_506_c_3_34 46605 47858 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_506_c_3 Rep_506_c_3_35 47870 49528 - 4.C.1.1.4
Gene ID: Rep_506_c_3_29
Type: CAZyme
Location: 36464 - 39184 (+)
Gene ID: Rep_506_c_3_30
Type: CAZyme
Location: 39191 - 41593 (+)
Gene ID: Rep_506_c_3_31
Type: CAZyme
Location: 41619 - 44027 (+)
Gene ID: Rep_506_c_3_32
Type: CAZyme
Location: 44142 - 46379 (+)
Gene ID: Rep_506_c_3_33
Type:
Location: 46386 - 46526 (+)
Gene ID: Rep_506_c_3_34
Type:
Location: 46605 - 47858 (-)
Gene ID: Rep_506_c_3_35
Type: TC
Location: 47870 - 49528 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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