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Cluster: Rep_506_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_506_c_3 Rep_506_c_3_1 128 757 + 1.B.14.6.1
pfam Rep_506_c_3 Rep_506_c_3_2 790 2505 + SusD_RagB
CAZyme Rep_506_c_3 Rep_506_c_3_3 2572 3795 - GH171
NULL(UNKNOWN) Rep_506_c_3 Rep_506_c_3_4 4189 4626 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_506_c_3 Rep_506_c_3_5 4635 5774 + DUF4377
TC Rep_506_c_3 Rep_506_c_3_6 5899 7116 + 2.A.1.35.1
pfam Rep_506_c_3 Rep_506_c_3_7 7124 7642 + DNA_binding_1 | Methyltransf_1N
STP Rep_506_c_3 Rep_506_c_3_8 7665 8201 + HD
TC Rep_506_c_3 Rep_506_c_3_9 8290 11034 + 1.B.42.1.8
Gene ID: Rep_506_c_3_1
Type: TC
Location: 128 - 757 (+)
Gene ID: Rep_506_c_3_2
Type: pfam
Location: 790 - 2505 (+)
Gene ID: Rep_506_c_3_3
Type: CAZyme
Location: 2572 - 3795 (-)
Gene ID: Rep_506_c_3_4
Type:
Location: 4189 - 4626 (+)
Gene ID: Rep_506_c_3_5
Type: pfam
Location: 4635 - 5774 (+)
Gene ID: Rep_506_c_3_6
Type: TC
Location: 5899 - 7116 (+)
Gene ID: Rep_506_c_3_7
Type: pfam
Location: 7124 - 7642 (+)
Gene ID: Rep_506_c_3_8
Type: STP
Location: 7665 - 8201 (+)
Gene ID: Rep_506_c_3_9
Type: TC
Location: 8290 - 11034 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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