Cluster: Rep_506_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_506
- CGC Family ID: CGCFAM_01306
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_506_c_70 | Rep_506_c_70_1 | 3 | 1880 | + | 3.D.10.1.5 |
| TC | Rep_506_c_70 | Rep_506_c_70_2 | 1916 | 2671 | + | 3.D.10.1.5 |
| STP | Rep_506_c_70 | Rep_506_c_70_3 | 3011 | 5068 | - | HD |
| pfam | Rep_506_c_70 | Rep_506_c_70_4 | 5154 | 6680 | + | tRNA-synt_1c | Anticodon_2 |
| CAZyme | Rep_506_c_70 | Rep_506_c_70_5 | 6690 | 7913 | + | GT30 |
Gene ID: Rep_506_c_70_1
Type: TC
Location: 3 - 1880 (+)
Type: TC
Location: 3 - 1880 (+)
Gene ID: Rep_506_c_70_2
Type: TC
Location: 1916 - 2671 (+)
Type: TC
Location: 1916 - 2671 (+)
Gene ID: Rep_506_c_70_3
Type: STP
Location: 3011 - 5068 (-)
Type: STP
Location: 3011 - 5068 (-)
Gene ID: Rep_506_c_70_4
Type: pfam
Location: 5154 - 6680 (+)
Type: pfam
Location: 5154 - 6680 (+)
Gene ID: Rep_506_c_70_5
Type: CAZyme
Location: 6690 - 7913 (+)
Type: CAZyme
Location: 6690 - 7913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.