Cluster: Rep_506_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_506
- CGC Family ID: CGCFAM_02810
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_506_c_48 | Rep_506_c_48_8 | 6374 | 8674 | - | GH2 |
| NULL(UNKNOWN) | Rep_506_c_48 | Rep_506_c_48_9 | 8857 | 9165 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_506_c_48 | Rep_506_c_48_10 | 9323 | 10120 | - | M48.UPC |
| CAZyme | Rep_506_c_48 | Rep_506_c_48_11 | 10294 | 12507 | + | GH36 |
| NULL(UNKNOWN) | Rep_506_c_48 | Rep_506_c_48_12 | 12526 | 12651 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_506_c_48 | Rep_506_c_48_13 | 12712 | 13905 | - | Aminotran_1_2 |
| TC | Rep_506_c_48 | Rep_506_c_48_14 | 13977 | 14681 | - | 1.A.14.2.2 |
Gene ID: Rep_506_c_48_8
Type: CAZyme
Location: 6374 - 8674 (-)
Type: CAZyme
Location: 6374 - 8674 (-)
Gene ID: Rep_506_c_48_9
Type:
Location: 8857 - 9165 (-)
Type:
Location: 8857 - 9165 (-)
Gene ID: Rep_506_c_48_10
Type: peptidase
Location: 9323 - 10120 (-)
Type: peptidase
Location: 9323 - 10120 (-)
Gene ID: Rep_506_c_48_11
Type: CAZyme
Location: 10294 - 12507 (+)
Type: CAZyme
Location: 10294 - 12507 (+)
Gene ID: Rep_506_c_48_12
Type:
Location: 12526 - 12651 (+)
Type:
Location: 12526 - 12651 (+)
Gene ID: Rep_506_c_48_13
Type: STP
Location: 12712 - 13905 (-)
Type: STP
Location: 12712 - 13905 (-)
Gene ID: Rep_506_c_48_14
Type: TC
Location: 13977 - 14681 (-)
Type: TC
Location: 13977 - 14681 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.