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Cluster: Rep_506_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_506_c_29 Rep_506_c_29_14 15243 17096 + GH13_46
CAZyme Rep_506_c_29 Rep_506_c_29_15 17378 19561 + GH97
TC Rep_506_c_29 Rep_506_c_29_16 19821 22826 + 1.B.14.6.1
TC Rep_506_c_29 Rep_506_c_29_17 22848 24515 + 8.A.46.1.1
pfam Rep_506_c_29 Rep_506_c_29_18 24536 25687 + SusE | SusF_SusE
NULL(UNKNOWN) Rep_506_c_29 Rep_506_c_29_19 25811 26041 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_506_c_29 Rep_506_c_29_20 26146 27036 - GH73
pfam Rep_506_c_29 Rep_506_c_29_21 27346 27825 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC Rep_506_c_29 Rep_506_c_29_22 28000 29502 - 2.A.35.1.1
Gene ID: Rep_506_c_29_14
Type: CAZyme
Location: 15243 - 17096 (+)
Gene ID: Rep_506_c_29_15
Type: CAZyme
Location: 17378 - 19561 (+)
Gene ID: Rep_506_c_29_16
Type: TC
Location: 19821 - 22826 (+)
Gene ID: Rep_506_c_29_17
Type: TC
Location: 22848 - 24515 (+)
Gene ID: Rep_506_c_29_18
Type: pfam
Location: 24536 - 25687 (+)
Gene ID: Rep_506_c_29_19
Type:
Location: 25811 - 26041 (-)
Gene ID: Rep_506_c_29_20
Type: CAZyme
Location: 26146 - 27036 (-)
Gene ID: Rep_506_c_29_21
Type: pfam
Location: 27346 - 27825 (+)
Gene ID: Rep_506_c_29_22
Type: TC
Location: 28000 - 29502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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