dbCAN Logo

Cluster: Rep_506_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_506_c_23 Rep_506_c_23_15 20982 22844 + 3.A.1.106.2
CAZyme Rep_506_c_23 Rep_506_c_23_16 22976 24250 + GT4
CAZyme Rep_506_c_23 Rep_506_c_23_17 24333 25328 + GT2
CAZyme Rep_506_c_23 Rep_506_c_23_18 25467 26447 - GT2
TC Rep_506_c_23 Rep_506_c_23_19 26595 28550 - 1.C.39.13.2
CAZyme Rep_506_c_23 Rep_506_c_23_20 28761 29639 - GT14
CAZyme Rep_506_c_23 Rep_506_c_23_21 29636 30541 - GT2
CAZyme Rep_506_c_23 Rep_506_c_23_22 30553 31395 - GT11
CAZyme Rep_506_c_23 Rep_506_c_23_23 31407 32306 - GT2
Gene ID: Rep_506_c_23_15
Type: TC
Location: 20982 - 22844 (+)
Gene ID: Rep_506_c_23_16
Type: CAZyme
Location: 22976 - 24250 (+)
Gene ID: Rep_506_c_23_17
Type: CAZyme
Location: 24333 - 25328 (+)
Gene ID: Rep_506_c_23_18
Type: CAZyme
Location: 25467 - 26447 (-)
Gene ID: Rep_506_c_23_19
Type: TC
Location: 26595 - 28550 (-)
Gene ID: Rep_506_c_23_20
Type: CAZyme
Location: 28761 - 29639 (-)
Gene ID: Rep_506_c_23_21
Type: CAZyme
Location: 29636 - 30541 (-)
Gene ID: Rep_506_c_23_22
Type: CAZyme
Location: 30553 - 31395 (-)
Gene ID: Rep_506_c_23_23
Type: CAZyme
Location: 31407 - 32306 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List