dbCAN Logo

Cluster: Rep_506_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_506_c_13 Rep_506_c_13_7 7549 9897 - GH3
CAZyme Rep_506_c_13 Rep_506_c_13_8 10334 13354 - GH95
TC Rep_506_c_13 Rep_506_c_13_9 13821 16997 + 1.B.14.6.1
pfam Rep_506_c_13 Rep_506_c_13_10 17024 18754 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_506_c_13 Rep_506_c_13_11 18777 20582 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_506_c_13 Rep_506_c_13_12 20691 22472 + GH5_4
pfam Rep_506_c_13 Rep_506_c_13_13 22554 23555 - Mfa2
TF Rep_506_c_13 Rep_506_c_13_14 23776 27777 + HTH_AraC | HTH_AraC
CAZyme Rep_506_c_13 Rep_506_c_13_15 27926 30814 + GH31_4
CAZyme Rep_506_c_13 Rep_506_c_13_16 30968 33472 + GH2
CAZyme Rep_506_c_13 Rep_506_c_13_17 33513 35840 + GH3
Gene ID: Rep_506_c_13_7
Type: CAZyme
Location: 7549 - 9897 (-)
Gene ID: Rep_506_c_13_8
Type: CAZyme
Location: 10334 - 13354 (-)
Gene ID: Rep_506_c_13_9
Type: TC
Location: 13821 - 16997 (+)
Gene ID: Rep_506_c_13_10
Type: pfam
Location: 17024 - 18754 (+)
Gene ID: Rep_506_c_13_11
Type:
Location: 18777 - 20582 (+)
Gene ID: Rep_506_c_13_12
Type: CAZyme
Location: 20691 - 22472 (+)
Gene ID: Rep_506_c_13_13
Type: pfam
Location: 22554 - 23555 (-)
Gene ID: Rep_506_c_13_14
Type: TF
Location: 23776 - 27777 (+)
Gene ID: Rep_506_c_13_15
Type: CAZyme
Location: 27926 - 30814 (+)
Gene ID: Rep_506_c_13_16
Type: CAZyme
Location: 30968 - 33472 (+)
Gene ID: Rep_506_c_13_17
Type: CAZyme
Location: 33513 - 35840 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List