dbCAN Logo

Cluster: Rep_505_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_505_c_33 Rep_505_c_33_18 17331 20543 - 1.B.14.6.3
NULL(UNKNOWN) Rep_505_c_33 Rep_505_c_33_19 20579 20731 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_505_c_33 Rep_505_c_33_20 20825 22000 + 2.A.1.36.3
pfam Rep_505_c_33 Rep_505_c_33_21 22014 23180 + DUF3843
TC Rep_505_c_33 Rep_505_c_33_22 23201 24364 - 9.B.97.1.2
TC Rep_505_c_33 Rep_505_c_33_23 24380 25999 - 3.A.1.121.4
NULL(UNKNOWN) Rep_505_c_33 Rep_505_c_33_24 26147 26266 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_505_c_33 Rep_505_c_33_25 26432 28213 - GH110
Gene ID: Rep_505_c_33_18
Type: TC
Location: 17331 - 20543 (-)
Gene ID: Rep_505_c_33_19
Type:
Location: 20579 - 20731 (-)
Gene ID: Rep_505_c_33_20
Type: TC
Location: 20825 - 22000 (+)
Gene ID: Rep_505_c_33_21
Type: pfam
Location: 22014 - 23180 (+)
Gene ID: Rep_505_c_33_22
Type: TC
Location: 23201 - 24364 (-)
Gene ID: Rep_505_c_33_23
Type: TC
Location: 24380 - 25999 (-)
Gene ID: Rep_505_c_33_24
Type:
Location: 26147 - 26266 (-)
Gene ID: Rep_505_c_33_25
Type: CAZyme
Location: 26432 - 28213 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List