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Cluster: Rep_505_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_505_c_22 Rep_505_c_22_13 13638 15224 + 9.B.174.1.1
CAZyme Rep_505_c_22 Rep_505_c_22_14 15254 17869 + GH2
NULL(UNKNOWN) Rep_505_c_22 Rep_505_c_22_15 18106 18777 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_505_c_22 Rep_505_c_22_16 18829 20811 + 3.D.10.1.5
TC Rep_505_c_22 Rep_505_c_22_17 20848 21603 + 3.D.10.1.5
NULL(UNKNOWN) Rep_505_c_22 Rep_505_c_22_18 21645 21749 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_505_c_22 Rep_505_c_22_19 21903 22889 - Thioredoxin_2 | Thioredoxin_8 | DUF5106
TC Rep_505_c_22 Rep_505_c_22_20 22923 24035 - 3.A.11.1.3
Gene ID: Rep_505_c_22_13
Type: TC
Location: 13638 - 15224 (+)
Gene ID: Rep_505_c_22_14
Type: CAZyme
Location: 15254 - 17869 (+)
Gene ID: Rep_505_c_22_15
Type:
Location: 18106 - 18777 (+)
Gene ID: Rep_505_c_22_16
Type: TC
Location: 18829 - 20811 (+)
Gene ID: Rep_505_c_22_17
Type: TC
Location: 20848 - 21603 (+)
Gene ID: Rep_505_c_22_18
Type:
Location: 21645 - 21749 (+)
Gene ID: Rep_505_c_22_19
Type: pfam
Location: 21903 - 22889 (-)
Gene ID: Rep_505_c_22_20
Type: TC
Location: 22923 - 24035 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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