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Cluster: Rep_505_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_505_c_4 Rep_505_c_4_71 76954 78651 + GH13_38
TC Rep_505_c_4 Rep_505_c_4_72 78883 80541 + 4.C.1.1.7
NULL(UNKNOWN) Rep_505_c_4 Rep_505_c_4_73 80550 81797 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_505_c_4 Rep_505_c_4_74 81820 82410 - cNMP_binding
TC Rep_505_c_4 Rep_505_c_4_75 82422 83309 - 2.A.115.1.1
STP Rep_505_c_4 Rep_505_c_4_76 83460 84689 + Aminotran_1_2
pfam Rep_505_c_4 Rep_505_c_4_77 84733 86922 + Gln-synt_C | GSIII_N | Gln-synt_C-ter
TC Rep_505_c_4 Rep_505_c_4_78 87071 88732 + 2.A.81.1.2
Gene ID: Rep_505_c_4_71
Type: CAZyme
Location: 76954 - 78651 (+)
Gene ID: Rep_505_c_4_72
Type: TC
Location: 78883 - 80541 (+)
Gene ID: Rep_505_c_4_73
Type:
Location: 80550 - 81797 (+)
Gene ID: Rep_505_c_4_74
Type: STP
Location: 81820 - 82410 (-)
Gene ID: Rep_505_c_4_75
Type: TC
Location: 82422 - 83309 (-)
Gene ID: Rep_505_c_4_76
Type: STP
Location: 83460 - 84689 (+)
Gene ID: Rep_505_c_4_77
Type: pfam
Location: 84733 - 86922 (+)
Gene ID: Rep_505_c_4_78
Type: TC
Location: 87071 - 88732 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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