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Cluster: Rep_505_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_505_c_3 Rep_505_c_3_28 35701 38898 - 1.B.14.6.1
sulfatase Rep_505_c_3 Rep_505_c_3_29 39350 40882 + S1_8
NULL(UNKNOWN) Rep_505_c_3 Rep_505_c_3_30 41000 41164 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_505_c_3 Rep_505_c_3_31 41183 42742 + GH109
sulfatase Rep_505_c_3 Rep_505_c_3_32 42903 44414 + S1_15
CAZyme Rep_505_c_3 Rep_505_c_3_33 44500 46719 + GH3
CAZyme Rep_505_c_3 Rep_505_c_3_34 46931 49531 + GH3
CAZyme Rep_505_c_3 Rep_505_c_3_35 49581 51914 + GH95
CAZyme Rep_505_c_3 Rep_505_c_3_36 51946 54282 + GH3
CAZyme Rep_505_c_3 Rep_505_c_3_37 54335 56725 + GH95
TC Rep_505_c_3 Rep_505_c_3_38 56899 58083 - 1.A.23.4.5
NULL(UNKNOWN) Rep_505_c_3 Rep_505_c_3_39 58114 58281 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_505_c_3 Rep_505_c_3_40 58663 58947 + Lys_export
TC Rep_505_c_3 Rep_505_c_3_41 58937 59563 + 2.A.124.1.4
TC Rep_505_c_3 Rep_505_c_3_42 59573 61057 - 9.B.168.1.2
peptidase Rep_505_c_3 Rep_505_c_3_43 61235 62833 + C26.964
TC Rep_505_c_3 Rep_505_c_3_44 62864 64738 + 2.A.9.3.1
Gene ID: Rep_505_c_3_28
Type: TC
Location: 35701 - 38898 (-)
Gene ID: Rep_505_c_3_29
Type: sulfatase
Location: 39350 - 40882 (+)
Gene ID: Rep_505_c_3_30
Type:
Location: 41000 - 41164 (-)
Gene ID: Rep_505_c_3_31
Type: CAZyme
Location: 41183 - 42742 (+)
Gene ID: Rep_505_c_3_32
Type: sulfatase
Location: 42903 - 44414 (+)
Gene ID: Rep_505_c_3_33
Type: CAZyme
Location: 44500 - 46719 (+)
Gene ID: Rep_505_c_3_34
Type: CAZyme
Location: 46931 - 49531 (+)
Gene ID: Rep_505_c_3_35
Type: CAZyme
Location: 49581 - 51914 (+)
Gene ID: Rep_505_c_3_36
Type: CAZyme
Location: 51946 - 54282 (+)
Gene ID: Rep_505_c_3_37
Type: CAZyme
Location: 54335 - 56725 (+)
Gene ID: Rep_505_c_3_38
Type: TC
Location: 56899 - 58083 (-)
Gene ID: Rep_505_c_3_39
Type:
Location: 58114 - 58281 (+)
Gene ID: Rep_505_c_3_40
Type: pfam
Location: 58663 - 58947 (+)
Gene ID: Rep_505_c_3_41
Type: TC
Location: 58937 - 59563 (+)
Gene ID: Rep_505_c_3_42
Type: TC
Location: 59573 - 61057 (-)
Gene ID: Rep_505_c_3_43
Type: peptidase
Location: 61235 - 62833 (+)
Gene ID: Rep_505_c_3_44
Type: TC
Location: 62864 - 64738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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