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Cluster: Rep_499_CGC93

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_131 Rep_499_c_131_1 107 2377 - GH92
CAZyme Rep_499_c_131 Rep_499_c_131_2 2382 4679 - GH92
STP Rep_499_c_131 Rep_499_c_131_3 4694 5686 - FecR
TF Rep_499_c_131 Rep_499_c_131_4 5736 6293 - GerE
CAZyme Rep_499_c_131 Rep_499_c_131_5 6321 8558 - GH92
pfam Rep_499_c_131 Rep_499_c_131_6 8852 11470 - tRNA-synt_2c | DHHA1 | tRNA_SAD
TC Rep_499_c_131 Rep_499_c_131_7 11577 12545 + 1.A.34.1.3
TF Rep_499_c_131 Rep_499_c_131_8 12566 12910 + MerR
STP Rep_499_c_131 Rep_499_c_131_9 13003 15246 - HD
CAZyme Rep_499_c_131 Rep_499_c_131_10 15319 16614 - GH23
Gene ID: Rep_499_c_131_1
Type: CAZyme
Location: 107 - 2377 (-)
Gene ID: Rep_499_c_131_2
Type: CAZyme
Location: 2382 - 4679 (-)
Gene ID: Rep_499_c_131_3
Type: STP
Location: 4694 - 5686 (-)
Gene ID: Rep_499_c_131_4
Type: TF
Location: 5736 - 6293 (-)
Gene ID: Rep_499_c_131_5
Type: CAZyme
Location: 6321 - 8558 (-)
Gene ID: Rep_499_c_131_6
Type: pfam
Location: 8852 - 11470 (-)
Gene ID: Rep_499_c_131_7
Type: TC
Location: 11577 - 12545 (+)
Gene ID: Rep_499_c_131_8
Type: TF
Location: 12566 - 12910 (+)
Gene ID: Rep_499_c_131_9
Type: STP
Location: 13003 - 15246 (-)
Gene ID: Rep_499_c_131_10
Type: CAZyme
Location: 15319 - 16614 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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