Cluster: Rep_499_CGC92
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_499
- CGC Family ID: CGCFAM_00372
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_499_c_127 | Rep_499_c_127_105 | 115437 | 118616 | + | 1.B.14.6.1 |
| TC | Rep_499_c_127 | Rep_499_c_127_106 | 118639 | 120342 | + | 8.A.46.1.3 |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_107 | 120351 | 122957 | + | PL15_2 |
| TC | Rep_499_c_127 | Rep_499_c_127_108 | 122975 | 123772 | + | 9.B.171.1.2 |
| pfam | Rep_499_c_127 | Rep_499_c_127_109 | 123785 | 124831 | + | DUF6562 |
| pfam | Rep_499_c_127 | Rep_499_c_127_110 | 124862 | 126535 | + | DUF6562 |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_111 | 126652 | 129192 | + | PL15 |
| pfam | Rep_499_c_127 | Rep_499_c_127_112 | 129217 | 130062 | + | DUF1961 |
| pfam | Rep_499_c_127 | Rep_499_c_127_113 | 130072 | 130926 | + | DUF1961 |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_114 | 131158 | 134160 | + | PL8_3 |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_115 | 134202 | 135401 | + | GH88 |
| TF | Rep_499_c_127 | Rep_499_c_127_116 | 135682 | 139656 | + | HTH_AraC |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_117 | 139684 | 142452 | - | PL15 |
| sulfatase | Rep_499_c_127 | Rep_499_c_127_118 | 142497 | 143897 | - | S1_14 |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_119 | 143916 | 145325 | - | GH29 |
| NULL(UNKNOWN) | Rep_499_c_127 | Rep_499_c_127_120 | 145361 | 146242 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_121 | 146262 | 148865 | - | PL15_2 |
| CAZyme | Rep_499_c_127 | Rep_499_c_127_122 | 148922 | 150121 | - | GH88 |
Gene ID: Rep_499_c_127_105
Type: TC
Location: 115437 - 118616 (+)
Type: TC
Location: 115437 - 118616 (+)
Gene ID: Rep_499_c_127_106
Type: TC
Location: 118639 - 120342 (+)
Type: TC
Location: 118639 - 120342 (+)
Gene ID: Rep_499_c_127_107
Type: CAZyme
Location: 120351 - 122957 (+)
Type: CAZyme
Location: 120351 - 122957 (+)
Gene ID: Rep_499_c_127_108
Type: TC
Location: 122975 - 123772 (+)
Type: TC
Location: 122975 - 123772 (+)
Gene ID: Rep_499_c_127_109
Type: pfam
Location: 123785 - 124831 (+)
Type: pfam
Location: 123785 - 124831 (+)
Gene ID: Rep_499_c_127_110
Type: pfam
Location: 124862 - 126535 (+)
Type: pfam
Location: 124862 - 126535 (+)
Gene ID: Rep_499_c_127_111
Type: CAZyme
Location: 126652 - 129192 (+)
Type: CAZyme
Location: 126652 - 129192 (+)
Gene ID: Rep_499_c_127_112
Type: pfam
Location: 129217 - 130062 (+)
Type: pfam
Location: 129217 - 130062 (+)
Gene ID: Rep_499_c_127_113
Type: pfam
Location: 130072 - 130926 (+)
Type: pfam
Location: 130072 - 130926 (+)
Gene ID: Rep_499_c_127_114
Type: CAZyme
Location: 131158 - 134160 (+)
Type: CAZyme
Location: 131158 - 134160 (+)
Gene ID: Rep_499_c_127_115
Type: CAZyme
Location: 134202 - 135401 (+)
Type: CAZyme
Location: 134202 - 135401 (+)
Gene ID: Rep_499_c_127_116
Type: TF
Location: 135682 - 139656 (+)
Type: TF
Location: 135682 - 139656 (+)
Gene ID: Rep_499_c_127_117
Type: CAZyme
Location: 139684 - 142452 (-)
Type: CAZyme
Location: 139684 - 142452 (-)
Gene ID: Rep_499_c_127_118
Type: sulfatase
Location: 142497 - 143897 (-)
Type: sulfatase
Location: 142497 - 143897 (-)
Gene ID: Rep_499_c_127_119
Type: CAZyme
Location: 143916 - 145325 (-)
Type: CAZyme
Location: 143916 - 145325 (-)
Gene ID: Rep_499_c_127_120
Type:
Location: 145361 - 146242 (-)
Type:
Location: 145361 - 146242 (-)
Gene ID: Rep_499_c_127_121
Type: CAZyme
Location: 146262 - 148865 (-)
Type: CAZyme
Location: 146262 - 148865 (-)
Gene ID: Rep_499_c_127_122
Type: CAZyme
Location: 148922 - 150121 (-)
Type: CAZyme
Location: 148922 - 150121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.