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Cluster: Rep_499_CGC86

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_122 Rep_499_c_122_28 34479 36221 - 8.A.46.1.1
TC Rep_499_c_122 Rep_499_c_122_29 36236 38983 - 1.B.14.6.1
CAZyme Rep_499_c_122 Rep_499_c_122_30 39106 41178 - GH20
CAZyme Rep_499_c_122 Rep_499_c_122_31 41178 43502 - GH20
CAZyme Rep_499_c_122 Rep_499_c_122_32 43539 46187 - GH2
CAZyme Rep_499_c_122 Rep_499_c_122_33 46248 49403 - CE20
sulfatase Rep_499_c_122 Rep_499_c_122_34 49480 50145 - S1_16
CAZyme Rep_499_c_122 Rep_499_c_122_35 50272 52290 - GH20
CAZyme Rep_499_c_122 Rep_499_c_122_36 52314 53996 - CBM93 | GH33
NULL(UNKNOWN) Rep_499_c_122 Rep_499_c_122_37 54308 54631 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_499_c_122 Rep_499_c_122_38 54638 55018 - DUF4377
TC Rep_499_c_122 Rep_499_c_122_39 55138 56586 - 8.A.46.1.4
Gene ID: Rep_499_c_122_28
Type: TC
Location: 34479 - 36221 (-)
Gene ID: Rep_499_c_122_29
Type: TC
Location: 36236 - 38983 (-)
Gene ID: Rep_499_c_122_30
Type: CAZyme
Location: 39106 - 41178 (-)
Gene ID: Rep_499_c_122_31
Type: CAZyme
Location: 41178 - 43502 (-)
Gene ID: Rep_499_c_122_32
Type: CAZyme
Location: 43539 - 46187 (-)
Gene ID: Rep_499_c_122_33
Type: CAZyme
Location: 46248 - 49403 (-)
Gene ID: Rep_499_c_122_34
Type: sulfatase
Location: 49480 - 50145 (-)
Gene ID: Rep_499_c_122_35
Type: CAZyme
Location: 50272 - 52290 (-)
Gene ID: Rep_499_c_122_36
Type: CAZyme
Location: 52314 - 53996 (-)
Gene ID: Rep_499_c_122_37
Type:
Location: 54308 - 54631 (-)
Gene ID: Rep_499_c_122_38
Type: pfam
Location: 54638 - 55018 (-)
Gene ID: Rep_499_c_122_39
Type: TC
Location: 55138 - 56586 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_499_c_122_33 vegan > omnivore 1.23668 0.01332
Rep_499_c_122_34 vegan > omnivore 1.13644 0.01332

🧭 Explore Read Mapping of CGC

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