Cluster: Rep_499_CGC76
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_499
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_499_c_103 | Rep_499_c_103_49 | 64059 | 67328 | + | 1.B.14.6.1 |
| pfam | Rep_499_c_103 | Rep_499_c_103_50 | 67341 | 68927 | + | SusD_RagB | SusD-like_3 |
| sulfatase | Rep_499_c_103 | Rep_499_c_103_51 | 68956 | 70602 | + | S1_24 |
| CAZyme | Rep_499_c_103 | Rep_499_c_103_52 | 70607 | 71962 | + | GH158 |
| NULL(UNKNOWN) | Rep_499_c_103 | Rep_499_c_103_53 | 71976 | 73190 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_499_c_103 | Rep_499_c_103_54 | 73276 | 75591 | + | GH3 |
| sulfatase | Rep_499_c_103 | Rep_499_c_103_55 | 75600 | 77591 | + | S1_24 |
| CAZyme | Rep_499_c_103 | Rep_499_c_103_56 | 77599 | 79839 | + | GH3 |
Gene ID: Rep_499_c_103_49
Type: TC
Location: 64059 - 67328 (+)
Type: TC
Location: 64059 - 67328 (+)
Gene ID: Rep_499_c_103_50
Type: pfam
Location: 67341 - 68927 (+)
Type: pfam
Location: 67341 - 68927 (+)
Gene ID: Rep_499_c_103_51
Type: sulfatase
Location: 68956 - 70602 (+)
Type: sulfatase
Location: 68956 - 70602 (+)
Gene ID: Rep_499_c_103_52
Type: CAZyme
Location: 70607 - 71962 (+)
Type: CAZyme
Location: 70607 - 71962 (+)
Gene ID: Rep_499_c_103_53
Type:
Location: 71976 - 73190 (+)
Type:
Location: 71976 - 73190 (+)
Gene ID: Rep_499_c_103_54
Type: CAZyme
Location: 73276 - 75591 (+)
Type: CAZyme
Location: 73276 - 75591 (+)
Gene ID: Rep_499_c_103_55
Type: sulfatase
Location: 75600 - 77591 (+)
Type: sulfatase
Location: 75600 - 77591 (+)
Gene ID: Rep_499_c_103_56
Type: CAZyme
Location: 77599 - 79839 (+)
Type: CAZyme
Location: 77599 - 79839 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_499_c_103_49 | vegan > omnivore | 1.33590 | 0.01332 |
| Rep_499_c_103_50 | vegan > omnivore | 1.23249 | 0.01332 |
| Rep_499_c_103_51 | vegan > omnivore | 2.23506 | 0.01332 |
| Rep_499_c_103_52 | vegan > omnivore | 2.03504 | 0.01332 |
| Rep_499_c_103_53 | vegan > omnivore | 1.06372 | 0.01332 |
| Rep_499_c_103_54 | vegan > omnivore | 1.25608 | 0.01332 |
| Rep_499_c_103_55 | vegan > omnivore | 1.19221 | 0.01332 |