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Cluster: Rep_499_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_76 Rep_499_c_76_62 76629 78773 - 1.B.14.10.1
pfam Rep_499_c_76 Rep_499_c_76_63 78776 79459 - HmuY
pfam Rep_499_c_76 Rep_499_c_76_64 79469 80323 - Calycin_like | Calycin_like
TC Rep_499_c_76 Rep_499_c_76_65 80529 82127 + 2.A.81.1.2
NULL(UNKNOWN) Rep_499_c_76 Rep_499_c_76_66 82198 82554 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_499_c_76 Rep_499_c_76_67 82640 84961 + 1.B.14.1.4
TC Rep_499_c_76 Rep_499_c_76_68 85101 86015 - 2.A.4.7.9
CAZyme Rep_499_c_76 Rep_499_c_76_69 86200 88506 + GH20
Gene ID: Rep_499_c_76_62
Type: TC
Location: 76629 - 78773 (-)
Gene ID: Rep_499_c_76_63
Type: pfam
Location: 78776 - 79459 (-)
Gene ID: Rep_499_c_76_64
Type: pfam
Location: 79469 - 80323 (-)
Gene ID: Rep_499_c_76_65
Type: TC
Location: 80529 - 82127 (+)
Gene ID: Rep_499_c_76_66
Type:
Location: 82198 - 82554 (+)
Gene ID: Rep_499_c_76_67
Type: TC
Location: 82640 - 84961 (+)
Gene ID: Rep_499_c_76_68
Type: TC
Location: 85101 - 86015 (-)
Gene ID: Rep_499_c_76_69
Type: CAZyme
Location: 86200 - 88506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_499_c_76_63 vegan > omnivore 1.67343 0.01332

🧭 Explore Read Mapping of CGC

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