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Cluster: Rep_499_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_76 Rep_499_c_76_3 1856 3613 + 3.A.2.3.3
TC Rep_499_c_76 Rep_499_c_76_4 3647 4972 + 3.A.2.3.3
pfam Rep_499_c_76 Rep_499_c_76_5 5016 5621 + ATP-synt_D
TC Rep_499_c_76 Rep_499_c_76_6 5618 7453 + 3.A.2.2.2
TC Rep_499_c_76 Rep_499_c_76_7 7527 7991 + 3.A.2.2.2
CAZyme Rep_499_c_76 Rep_499_c_76_8 8193 9854 + GT3
CAZyme Rep_499_c_76 Rep_499_c_76_9 9893 12457 + GT35
pfam Rep_499_c_76 Rep_499_c_76_10 12589 13692 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
TC Rep_499_c_76 Rep_499_c_76_11 13831 15222 + 3.A.1.11.8
TC Rep_499_c_76 Rep_499_c_76_12 15234 16034 + 3.A.1.11.8
TC Rep_499_c_76 Rep_499_c_76_13 16028 16819 + 3.A.1.11.8
Gene ID: Rep_499_c_76_3
Type: TC
Location: 1856 - 3613 (+)
Gene ID: Rep_499_c_76_4
Type: TC
Location: 3647 - 4972 (+)
Gene ID: Rep_499_c_76_5
Type: pfam
Location: 5016 - 5621 (+)
Gene ID: Rep_499_c_76_6
Type: TC
Location: 5618 - 7453 (+)
Gene ID: Rep_499_c_76_7
Type: TC
Location: 7527 - 7991 (+)
Gene ID: Rep_499_c_76_8
Type: CAZyme
Location: 8193 - 9854 (+)
Gene ID: Rep_499_c_76_9
Type: CAZyme
Location: 9893 - 12457 (+)
Gene ID: Rep_499_c_76_10
Type: pfam
Location: 12589 - 13692 (-)
Gene ID: Rep_499_c_76_11
Type: TC
Location: 13831 - 15222 (+)
Gene ID: Rep_499_c_76_12
Type: TC
Location: 15234 - 16034 (+)
Gene ID: Rep_499_c_76_13
Type: TC
Location: 16028 - 16819 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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