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Cluster: Rep_499_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_75 Rep_499_c_75_6 7743 9620 - 2.A.21.3.8
pfam Rep_499_c_75 Rep_499_c_75_7 10356 11567 + AAA_14 | DUF4143
NULL(UNKNOWN) Rep_499_c_75 Rep_499_c_75_8 11737 11892 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_499_c_75 Rep_499_c_75_9 12074 13264 - GH130_1
NULL(UNKNOWN) Rep_499_c_75 Rep_499_c_75_10 13356 14813 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_499_c_75 Rep_499_c_75_11 14833 16422 - GH30_6
TC Rep_499_c_75 Rep_499_c_75_12 16448 18250 - 8.A.46.1.3
TC Rep_499_c_75 Rep_499_c_75_13 18276 21329 - 1.B.14.6.1
Gene ID: Rep_499_c_75_6
Type: TC
Location: 7743 - 9620 (-)
Gene ID: Rep_499_c_75_7
Type: pfam
Location: 10356 - 11567 (+)
Gene ID: Rep_499_c_75_8
Type:
Location: 11737 - 11892 (-)
Gene ID: Rep_499_c_75_9
Type: CAZyme
Location: 12074 - 13264 (-)
Gene ID: Rep_499_c_75_10
Type:
Location: 13356 - 14813 (-)
Gene ID: Rep_499_c_75_11
Type: CAZyme
Location: 14833 - 16422 (-)
Gene ID: Rep_499_c_75_12
Type: TC
Location: 16448 - 18250 (-)
Gene ID: Rep_499_c_75_13
Type: TC
Location: 18276 - 21329 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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