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Cluster: Rep_499_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_73 Rep_499_c_73_70 91835 93385 - GH20
pfam Rep_499_c_73 Rep_499_c_73_71 93396 94181 - Glucosamine_iso
CAZyme Rep_499_c_73 Rep_499_c_73_72 94189 95373 - CE9
TC Rep_499_c_73 Rep_499_c_73_73 95349 96677 - 2.A.1.7.9
pfam Rep_499_c_73 Rep_499_c_73_74 96690 97811 - HGSNAT_cat
CAZyme Rep_499_c_73 Rep_499_c_73_75 97828 99162 - GH18
TC Rep_499_c_73 Rep_499_c_73_76 99218 100804 - 8.A.46.2.2
TC Rep_499_c_73 Rep_499_c_73_77 100821 103961 - 1.B.14.6.2
CAZyme Rep_499_c_73 Rep_499_c_73_78 104052 105125 - GH16_3
Gene ID: Rep_499_c_73_70
Type: CAZyme
Location: 91835 - 93385 (-)
Gene ID: Rep_499_c_73_71
Type: pfam
Location: 93396 - 94181 (-)
Gene ID: Rep_499_c_73_72
Type: CAZyme
Location: 94189 - 95373 (-)
Gene ID: Rep_499_c_73_73
Type: TC
Location: 95349 - 96677 (-)
Gene ID: Rep_499_c_73_74
Type: pfam
Location: 96690 - 97811 (-)
Gene ID: Rep_499_c_73_75
Type: CAZyme
Location: 97828 - 99162 (-)
Gene ID: Rep_499_c_73_76
Type: TC
Location: 99218 - 100804 (-)
Gene ID: Rep_499_c_73_77
Type: TC
Location: 100821 - 103961 (-)
Gene ID: Rep_499_c_73_78
Type: CAZyme
Location: 104052 - 105125 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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