Cluster: Rep_499_CGC50
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: Rep_499
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_499_c_71 | Rep_499_c_71_33 | 32783 | 33733 | - | GH18 |
| TC | Rep_499_c_71 | Rep_499_c_71_34 | 33760 | 35361 | - | 8.A.46.2.2 |
| TC | Rep_499_c_71 | Rep_499_c_71_35 | 35384 | 38689 | - | 1.B.14.6.13 |
| STP | Rep_499_c_71 | Rep_499_c_71_36 | 38865 | 39854 | - | FecR |
| TF | Rep_499_c_71 | Rep_499_c_71_37 | 39902 | 40441 | - | GerE |
| CAZyme | Rep_499_c_71 | Rep_499_c_71_38 | 40569 | 42911 | - | GH3 |
| pfam | Rep_499_c_71 | Rep_499_c_71_39 | 42986 | 44056 | - | DUF1573 | DUF1573 | HYDIN_VesB_CFA65-like_Ig | HYDIN_VesB_CFA65-like_Ig |
| pfam | Rep_499_c_71 | Rep_499_c_71_40 | 44123 | 44827 | - | Laminin_G_3 |
| CAZyme | Rep_499_c_71 | Rep_499_c_71_41 | 45007 | 46047 | - | GH18 |
| TC | Rep_499_c_71 | Rep_499_c_71_42 | 46072 | 47679 | - | 8.A.46.2.2 |
| TC | Rep_499_c_71 | Rep_499_c_71_43 | 47706 | 50999 | - | 1.B.14.6.13 |
| STP | Rep_499_c_71 | Rep_499_c_71_44 | 51253 | 52176 | - | FecR |
| CAZyme | Rep_499_c_71 | Rep_499_c_71_45 | 52271 | 54262 | - | GH33 |
Gene ID: Rep_499_c_71_33
Type: CAZyme
Location: 32783 - 33733 (-)
Type: CAZyme
Location: 32783 - 33733 (-)
Gene ID: Rep_499_c_71_34
Type: TC
Location: 33760 - 35361 (-)
Type: TC
Location: 33760 - 35361 (-)
Gene ID: Rep_499_c_71_35
Type: TC
Location: 35384 - 38689 (-)
Type: TC
Location: 35384 - 38689 (-)
Gene ID: Rep_499_c_71_36
Type: STP
Location: 38865 - 39854 (-)
Type: STP
Location: 38865 - 39854 (-)
Gene ID: Rep_499_c_71_37
Type: TF
Location: 39902 - 40441 (-)
Type: TF
Location: 39902 - 40441 (-)
Gene ID: Rep_499_c_71_38
Type: CAZyme
Location: 40569 - 42911 (-)
Type: CAZyme
Location: 40569 - 42911 (-)
Gene ID: Rep_499_c_71_39
Type: pfam
Location: 42986 - 44056 (-)
Type: pfam
Location: 42986 - 44056 (-)
Gene ID: Rep_499_c_71_40
Type: pfam
Location: 44123 - 44827 (-)
Type: pfam
Location: 44123 - 44827 (-)
Gene ID: Rep_499_c_71_41
Type: CAZyme
Location: 45007 - 46047 (-)
Type: CAZyme
Location: 45007 - 46047 (-)
Gene ID: Rep_499_c_71_42
Type: TC
Location: 46072 - 47679 (-)
Type: TC
Location: 46072 - 47679 (-)
Gene ID: Rep_499_c_71_43
Type: TC
Location: 47706 - 50999 (-)
Type: TC
Location: 47706 - 50999 (-)
Gene ID: Rep_499_c_71_44
Type: STP
Location: 51253 - 52176 (-)
Type: STP
Location: 51253 - 52176 (-)
Gene ID: Rep_499_c_71_45
Type: CAZyme
Location: 52271 - 54262 (-)
Type: CAZyme
Location: 52271 - 54262 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_499_c_71_38 | vegan > omnivore | 1.33966 | 0.01332 |